Mireya Cueto Garrido
af1b8e9956
- Updated Dockerfile to improve security with a non-root user and added health checks. - Modified docker-compose.yml to set containers as read-only, restrict ports to localhost, and implement health checks. - Enhanced .env.example with additional environment variables for security and configuration. - Improved FastAPI application with middleware for security headers, CORS, and body size limits. - Refactored authentication flow in auth.py to include state validation and improved error handling. - Added rate limiting to various endpoints to prevent abuse. - Updated researcher and publication handling to ensure better validation and error management.
116 lines
4.4 KiB
Python
116 lines
4.4 KiB
Python
from datetime import datetime
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from xml.etree.ElementTree import Element, SubElement, tostring
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from app.db.models import Publication, Researcher
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ATOM_NS = "http://www.w3.org/2005/Atom"
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DC_NS = "http://purl.org/dc/elements/1.1/"
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EXTRA_NS = "http://example.org/orcid-extra" # namespace para campos extendidos
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# ---------------------------------------------------------
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# Clase de generador de feed SWORD
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# ---------------------------------------------------------
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class SWORDGenerator:
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@staticmethod
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def generate_feed_xml(researcher: Researcher, publications: list[Publication]) -> bytes:
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feed = Element("feed", {
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"xmlns": ATOM_NS,
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"xmlns:dc": DC_NS,
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"xmlns:extra": EXTRA_NS
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})
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SubElement(feed, "title").text = f"Publications for {researcher.orcid_id}"
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author = SubElement(feed, "author")
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SubElement(author, "name").text = researcher.name or "Unknown"
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SubElement(feed, "updated").text = datetime.utcnow().isoformat() + "Z"
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SubElement(feed, "id").text = f"urn:uuid:{researcher.id}"
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for pub in publications:
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entry = SubElement(feed, "entry")
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SubElement(entry, "id").text = f"urn:uuid:{pub.id}"
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SubElement(entry, "updated").text = datetime.utcnow().isoformat() + "Z"
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# Title
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SubElement(entry, f"{{{DC_NS}}}title").text = pub.title or "Untitled"
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# Subtitle
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if pub.subtitle:
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SubElement(entry, f"{{{EXTRA_NS}}}subtitle").text = pub.subtitle
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# DOI
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if pub.doi:
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SubElement(entry, f"{{{DC_NS}}}identifier").text = f"doi:{pub.doi}"
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# Journal
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if pub.journal:
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SubElement(entry, f"{{{DC_NS}}}source").text = pub.journal
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# URL
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if pub.url:
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SubElement(entry, f"{{{DC_NS}}}relation").text = pub.url
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# Short description
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if pub.short_description:
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SubElement(entry, f"{{{DC_NS}}}description").text = pub.short_description
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# Citation
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if pub.citation_value:
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cit = SubElement(entry, f"{{{EXTRA_NS}}}citation")
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SubElement(cit, "type").text = pub.citation_type or "unknown"
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SubElement(cit, "value").text = pub.citation_value
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# Language
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if pub.language_code:
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SubElement(entry, f"{{{DC_NS}}}language").text = pub.language_code
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# Country
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if pub.country:
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SubElement(entry, f"{{{EXTRA_NS}}}country").text = pub.country
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# External IDs
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if pub.external_ids:
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ext_ids_el = SubElement(entry, f"{{{EXTRA_NS}}}external_ids")
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for ext in pub.external_ids:
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ext_el = SubElement(ext_ids_el, "external_id")
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for k, v in ext.items():
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if isinstance(v, dict) and "value" in v:
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SubElement(ext_el, k).text = v["value"]
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else:
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SubElement(ext_el, k).text = str(v)
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# Contributors
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if pub.contributors:
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contribs_el = SubElement(entry, f"{{{EXTRA_NS}}}contributors")
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for c in pub.contributors:
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c_el = SubElement(contribs_el, "contributor")
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SubElement(c_el, "name").text = c.get("name")
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SubElement(c_el, "orcid").text = c.get("orcid")
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SubElement(c_el, "role").text = c.get("role")
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# Date
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if pub.pub_year:
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date_str = str(pub.pub_year)
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if pub.pub_month:
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date_str += f"-{pub.pub_month:02d}"
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if pub.pub_day:
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date_str += f"-{pub.pub_day:02d}"
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SubElement(entry, f"{{{DC_NS}}}date").text = date_str
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# Type
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if pub.type:
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SubElement(entry, f"{{{DC_NS}}}type").text = pub.type
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# Status (new / updated / unchanged)
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if hasattr(pub, "status") and pub.status:
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SubElement(entry, f"{{{EXTRA_NS}}}status").text = pub.status
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# Last modified
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if pub.last_modified:
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SubElement(entry, f"{{{EXTRA_NS}}}last_modified").text = pub.last_modified.isoformat()
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return tostring(feed, encoding="utf-8", xml_declaration=True)
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